We need to update lwjgl from 3.0.0 to 3.1.0(3.1.2 requires to change code), because start from the version they use other solution with native libraries and other user can overwrite these dependences from jME.

jme3-lwjgl3/build.gradle

@@ -2,7 +2,7 @@ if (!hasProperty('mainClass')) {
     ext.mainClass = ''
 }
 
-def lwjglVersion = '3.0.0'
+def lwjglVersion = '3.1.0'
 
 sourceCompatibility = '1.8'
 
@@ -10,8 +10,10 @@ dependencies {
     compile project(':jme3-core')
     compile project(':jme3-desktop')
 
-    compile "org.lwjgl:lwjgl:${lwjglVersion}"
+    compile group: 'org.lwjgl', name: 'lwjgl', version: lwjglVersion
-    compile "org.lwjgl:lwjgl-platform:${lwjglVersion}:natives-windows"
+    compile group: 'org.lwjgl', name: 'lwjgl-glfw', version: lwjglVersion
-    compile "org.lwjgl:lwjgl-platform:${lwjglVersion}:natives-linux"
+    compile group: 'org.lwjgl', name: 'lwjgl-openal', version: lwjglVersion
-    compile "org.lwjgl:lwjgl-platform:${lwjglVersion}:natives-osx"
+    compile group: 'org.lwjgl', name: 'lwjgl-opencl', version: lwjglVersion
+    compile group: 'org.lwjgl', name: 'lwjgl-opengl', version: lwjglVersion
+    compile group: 'org.lwjgl', name: 'lwjgl-jemalloc', version: lwjglVersion
 }